@prefix adms: . @prefix aiiso: . @prefix cc: . @prefix dc: . @prefix dcat: . @prefix foaf: . @prefix gsp: . @prefix locn: . @prefix mads: . @prefix org: . @prefix owl: . @prefix rdf: . @prefix rdfs: . @prefix schema: . @prefix skos: . @prefix tdwgi: . @prefix time: . @prefix vcard: . @prefix void: . @prefix xml: . @prefix xsd: . a void:DatasetDescription ; cc:license ; foaf:primaryTopic . a dcat:Dataset ; dc:contributor """Natalie Cooper (NHM)\r Alexander L Bond (NHM)\r Joshua L. Davis (NHM)\r Roberto Portela Miguez (NHM)\r Louise Tomsett (NHM)\r Kristofer M Helgen (University of Adelaide; NHM)""" ; dc:creator [ a vcard:Person ; mads:hasAffiliation ; vcard:fn "Natalie Cooper; Alexander L Bond; Joshua L Davis; Roberto Portela Miguez; Louise Tomsett; Kristofer M Helgen" ] ; dc:identifier <10.5519/0065209> ; dc:issued "2019-04-08T11:55:39.911282"^^xsd:dateTime ; dc:license ; dc:modified "2019-10-16T13:39:57.431699"^^xsd:dateTime ; dc:temporal "1750-2018" ; dc:title "Sex biases in natural history collections of birds and mammals." ; dcat:contactPoint ; dcat:description """Data from paper: **Sex biases in natural history collections of birds and mammals**. [link to paper](http://dx.doi.org/10.1098/rspb.2019.2025).\r \r > Natalie Cooper, Alexander L. Bond, Joshua L. Davis, Roberto Portela Miguez, Louise Tomsett, and Kristofer M. Helgen. 2019. Sex biases in bird and mammal natural history collections. Proceedings of the Royal Society Series B: Biological Sciences. 286, 20192025. DOI:10.1098/rspb.2019.2025.\r \r The analyses require the two tidied datasets `all-specimen-data.csv` (unzipped) and `all-extra-data.csv`. Raw data sources used to build these are listed in the metadata or provided in `ornamentation.csv`. More details can be found at https://github.com/nhcooper123/sex-bias-museums.""" ; dcat:distribution , , , , , ; dcat:keyword "birds", "collections", "mammals", "sex bias" ; dcat:landingPage , , , , , ; dcat:theme [ a skos:Concept ; skos:prefLabel "Research" ] . a vcard:Person ; mads:hasAffiliation ; vcard:fn "Natalie Cooper" ; vcard:hasEmail . a aiiso:Institution, org:Organization, foaf:Organization ; tdwgi:acronymOrCoden "NHMUK" ; tdwgi:institutionType ; = , ; foaf:name "Natural History Museum" . a dcat:Distribution ; dc:description "This has the same metadata details as *all-specimen-data.csv*, except it uses the Genus rather than the binomial as the unit of analysis. As such some specimens are included here that were excluded in *all-specimen-data.csv* because they have a valid Genus but not binomial name." ; dc:format "CSV" ; dc:title "Generic-level specimen data" ; dcat:accessURL . a dcat:Distribution ; dc:description """This is a tidied version of specimen records data downloaded from GBIF. If using this data please cite the sources listed below. The raw data input files come from:\r \r * GBIF: The Global Biodiversity Information Facility. https://www.gbif.org/ (2018).\r * Trombone, T., AMNH Bird Collection. American Museum of Natural History. Occurrence dataset https://doi.org/10.15468/xvzdcm accessed via GBIF.org on 2018-08-03 (2013).\r * Trombone, T., AMNH Mammal Collections. American Museum of Natural History. Occurrence Dataset https://doi.org/10.15468/wu3poe accessed via GBIF.org on 2018-08-09 (2016).\r * Grant, S. & Marks, B., Field Museum of Natural History (Zoology) Bird Collection. Version 14.4. Field Museum. Occurrence dataset https://doi.org/10.15468/exkxdx accessed via GBIF.org on 2018-08-03. (2018).\r * Grant, S. & Ferguson, A., Field Museum of Natural History (Zoology) Mammal Collection. Version 9.3. Field Museum. Occurrence Dataset https://doi.org/10.15468/n4zgxw accessed via GBIF.org on 2018-08-09 (2018).\r * Museum National d’Histoire Naturelle, The birds collection (ZO) of the Muse ́um national d’Histoire Naturelle (MNHN - Paris). Version 42.70. Occurrence dataset https://doi.org/10.15468/h0xtwv accessed via GBIF.org on 2018-08-03 (2018).\r * Museum National d’Histoire Naturelle, The mammals collection (ZM) of the Muse ́um national d’Histoire naturelle (MNHN - Paris). Version 43.55. Occurrence Dataset https://doi.org/10.15468/j0xw9i accessed via GBIF.org on 2018-08-09 (2018).\r * Orrell, T. & Hollowell, T., NMNH Extant Specimen Records. Version 1.16. National Museum of Natural History, Smithsonian Institution. Occurrence Dataset https://doi.org/10.15468/hnhrg3 accessed via GBIF.org on 2018-08-09 (2018).\r * Natural History Museum, Natural History Museum (London) Collection Specimens. Collection Specimens. Occurrence dataset https://doi.org/10.5519/0002965 accessed via GBIF.org on 2018-08-09. (2018).\r \r Columns contain the following.\r \r * **institutionCode** = museum the specimen came from. AMNH = American Museum of Natural History; FMNH = Field Museum of Natural History; MNHN = Museum Nationale d'Histoire Naturelle; NMNH = National Museum of Natural History (Smithsonian); NHMUK = Natural History Museum, London.\r * **specID** = Specimen ID (made up of institutionCode_specimen ID).\r * **binomial** = Species binomial name\r * **sex** = Female or Male.\r * **class** = Birds or Mammals. \r * **order** = Order.\r * **family** = Family.\r * **genus** = Genus.\r * **continent** = Continent specimen was collected from.\r * **year** = Year of collection. \r * **decade** = Decade of collection.\r * **typeStatus** = NA if not a type, if a type the kind of type (e.g. Holotype, Syntype etc.) is listed.\r * **type** = Type or NonType.""" ; dc:format "ZIP" ; dc:title "all-specimen-data.csv" ; dcat:accessURL . a dcat:Distribution ; dc:description "See `all-extra-data.csv` documentation for metadata." ; dc:format "CSV" ; dc:title "Raw ornamentation data for mammals" ; dcat:accessURL . a dcat:Distribution ; dc:description """This is a tidied version of extra data required for the analyses. If using this data please cite the sources listed below.\r \r Raw body mass data comes from Lislevand et al. (2007) for birds and Jones et al. (2009) for mammals [the sex disaggregated version of this data is hard to access so we have uploaded it here too]. \r \r * Lislevand, T., Figuerola, J. & Sze ́kely, T., Avian body sizes in relation to fecundity, mating system, display behavior, and resource sharing. Ecology 88, 1605–1605 (2007).\r * Jones, K. E., Bielby, J., Cardillo, M., Fritz, S. A., O’Dell, J., Orme, C. D. L., Safi, K., Sechrest, W., Boakes, E. H., Carbone, C., Connolly, C., Cutts, M. J., Foster, J. K., Grenyer, R., Habib, M., Plaster, C. A., Price, S. A., Rigby, E. A., Rist, J., Teacher, A., Bininda-Emonds, O. R. P., Gittleman, J. L., Mace, G. M. & Purvis, A., PanTHERIA: a species-level database of life history, ecology, and geography of extant and recently extinct mammals. Ecology 90, 2648–2648 (2009).\r \r Raw plumage data comes from:\r \r * Dale, J., Dey, C. J., Delhey, K., Kempenaers, B. & Valcu, M., Data from: The effects of life history and sexual selection on male and female plumage colouration. Dryad Digital Repository. https://doi.org/10.5061/dryad.1rp0s (2015).\r * Dale, J., Dey, C. J., Delhey, K., Kempenaers, B. & Valcu, M., The effects of life history and sexual selection on male and female plumage colouration. Nature 527, 367 (2015).\r \r Raw ornamentation data was collected for this project; the raw data file is available in this dataset.\r \r Columns contain the following.\r \r * **binomial** = Species binomial name.\r * **male_mass** = Body mass of males (g).\r * **female_mass** = Body mass of females (g).\r * **SSD** = Male/Female body mass.\r * **male_plumage** = male plumage pixel score (see Dale et al for details). \r * **female_plumage** = female plumage pixel score (see Dale et al for details).\r * **plumageD** = male/female plumage score.\r * **ornamentation** = Does the mammal have horns, tusks, antlers, ossicles, nasal extensions, cheek extensions, coloured facial patterns or a mane? (Present/Absent). \r * **ornamentedsex** = Which sex has the ornamentation (Both, Male, Unclear).\r * **extremesex** = Which sex has more extreme ornaments (Both, Male, Unclear).\r * **feature** = What kind of feature is the ornament: horn (includes antlers), tusk, ossicle, colour, mane, nasal, or cheek.""" ; dc:format "CSV" ; dc:title "all-extra-data.csv" ; dcat:accessURL . a dcat:Distribution ; dc:description """If using this data please cite Jones et al. 2009. Refer to this paper for metadata.\r \r * Jones, K. E., Bielby, J., Cardillo, M., Fritz, S. A., O’Dell, J., Orme, C. D. L., Safi, K., Sechrest, W., Boakes, E. H., Carbone, C., Connolly, C., Cutts, M. J., Foster, J. K., Grenyer, R., Habib, M., Plaster, C. A., Price, S. A., Rigby, E. A., Rist, J., Teacher, A., Bininda-Emonds, O. R. P., Gittleman, J. L., Mace, G. M. & Purvis, A., PanTHERIA: a species-level database of life history, ecology, and geography of extant and recently extinct mammals. Ecology 90, 2648–2648 (2009).""" ; dc:format "TXT" ; dc:title "Disaggregated body mass data from Jones et al 2009." ; dcat:accessURL . a dcat:Distribution ; dc:description """Adult sex ratio (ASR) data from wild birds taken from Szekely et al. 2014. Sex-biased survival predicts adult sex ratio variation in wild birds. PRSB, 281(1788): 20140342. \r \r **If you use this data please cite the original paper**""" ; dc:format "CSV" ; dc:title "Szekely et al 2014 ASR data" ; dcat:accessURL .