Data from the "Back to the water" project
Data and Resources
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CSV
fulldata_combined.csv
This is the data used for analyses in paper 1. species - species name tl -...
3899 records
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RDS
imputed_data_wZBL.RDS
Large RDS file containing the imputed body size data used in all analyses.
586KB
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CSV
Total-length-data-from-literature.csv
Raw total length data, for living and fossil species, taken from the...
3259 records
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TXT
References_Total-length-data-from-literature.txt
Reference list for entries in the references column of the...
58KB
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CSV
Extant-proxy-measurement-data.csv
Raw data for total length proxy measurements taken from extant specimens at...
372 records
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CSV
Fossil-proxy-measurement-data.csv
Raw data for proxy measurements to estimate total length from fossil taxa,...
268 records
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TXT
References_Fossil-proxy-measurement-data.txt
Reference list for entries in the references column of the...
39KB
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final_tree_cetacea.tre
Phylogeny for Cetacea from Lloyd & Slater (2021). This tree belongs to...
23KB
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noarchaeo_wZBL.tre
Phylogeny for Cetacea excluding Archaeocetes, containing only the species...
15KB
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CSV
Output from Fabric model
The output was too large for the supplemental materials so we include it here...
25KB
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pinniped_median_noanc.tre
Full phylogeny without sampled ancestors used in diversification analyses in...
4KB
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TRE
pinniped_median_fossil_noanc.tre
Fossil phylogeny without sampled ancestors used in diversification analyses...
3KB
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TRE
pinniped-tree-extant_9areas.tre
Extant phylogeny for taxa used in biogeography analyses in paper 2.
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pinniped-tree-fossil_9areas.tre
Fossil phylogeny for taxa used in biogeography analyses in paper 2.
4KB
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TXT
pinniped-all-geography_9areas.txt
Geography file for all taxa used in biogeography analyses in paper 2.
4KB
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TXT
pinniped-extant-geography_9areas.txt
Geography file for extant taxa used in biogeography analyses in paper 2.
1KB
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TXT
pinniped-fossil-geography_9areas.txt
Geography file for fossil taxa used in biogeography analyses in paper 2.
3KB
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TXT
pinniped_areas_new_GB_phylip-JRule_edit-nocomments.txt
Raw geography data for biogeography analyses in paper 2.
3KB
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CSV
DEC-all-node-probabilities.csv
All node probabilities from the DEC model for all taxa. node = node number...
119 records
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CSV
DECJ-all-node-probabilities.csv
All node probabilities from the DEC+J model for all taxa. node = node number...
119 records
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PNG
node-labels-tree.png
Tree with node numbers for use in interpreting DEC-all-node-probabilities.csv...
478KB
Paper 1
(23 resources)Paper 2
(18 resources)Cite this as
Additional Info
Field | Value |
---|---|
Primary contributors |
Park, Travis
(
0000-0002-9492-8859);
Burin, Gustavo;
Slater, Graham J;
Cooper, Natalie
(
0000-0003-4919-8655)
|
Other contributors |
|
Last updated | 17 October 2023 |
Last resource update | 17 October 2023 (README_PAPER2.md) |
Created | 10 May 2022 |
License | Creative Commons Attribution |